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eNanoMapper documentation map V1.0

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eNanoMapper </p> <p> documentation map V1.0DataDevelopmentAPIAMBIT web servicesServicesDatabaseData accessSearchData sourcesUser guidanceTutorialsEntering and analysing nano safety dataAMBIT user guideWebinarsA substance database to support a safe i ...Data visualization with AMBIT.JS and D3J ...PublicationsDoWIssue trackerReportingD3.1 Technical Specification and initial ...D3.2 Data Management System with extende ...D3.3 Modules and services for linking an ...D3.4 ISA-Tab templates for common biosel ...Analysis and modellingApplicationsJaqPotQuattro
APIFeedbackSource codeImage Descriptor Calculation Web Tool
RRegrs PackageUser guidanceTutorialsImage descriptorRRegrs packageWebinarsPublicationsDoWIssue trackerReportingD4.1 Analysis and Modelling Specificatio ...D4.2 Descriptor Calculation Algorithms a ...D4.3 nQSAR Modelling infrastructureD4.4 Mechanism-of-action Modelling ToolsD4.5 Design of experiments and inter-lab ...D4.6 Tools for generating QMRF and QPRF ...OntologyDevelopmentNanoParticle OntologyOntologiesFeedbackLicencesBasic Formal OntologySlimmerViewerTest suiteExploreDownload .owlBioportalAber-OWLOntology Lookup ServiceUser guidanceTutorialsBrowsing the eNM ontology with bioportal ...WebinarsUsing the eNanoMapper ontologyPublications Hastings et al., 2015, Journal of Biome ...Hastings et al., 2014, JBMS supplement: ...DoWIssue trackerReportingD2.1 Framework and Infrastructure for On ...D2.2 Ontology Content Types and Existing ...D2.3 Ontology initial releaseD2.4 Ontology final releaseProject managementDescriptionPublic websiteEC CORDISPeriodic Report 1 (summary)Periodic Report 2 (summary)NanoSafety Cluster (NSC)DoWInternal documentationIssue trackerInternal review & approval processReportingD7.1 Kick-Off MeetingD7.2 Year 1 MeetingD7.3 First Annual Technical and Financia ...D7.4 Review MeetingD7.5 Year 2 MeetingD7.6 Second Annual Technical and Financi ...D7.7 Final MeetingPartnersDouglas Connect GmbH (DC)The National Technical University of Ath ...In Silico Toxicology GmbH (IST)IDEAconsult Ltd. (IDEA)Karolinska Institutet (KI)The European Bioinformatics Institute (E ...Maastricht University (UM)Misvik Biology (MB)Associate partnersDisseminationPublicationsPresentationsTutorialsWebinarsEventsDoWIssue trackerReportingD6.1 eNanoMapper Year 1 Dissemination Re ...D6.2 eNanoMapper Year 2 Dissemination Re ...D6.3 eNanoMapper TutorialsD6.4 eNanoMapper Community Development R ...D6.5 eNanoMapper Exploitation ReportD6.6 eNanoMapper Final Dissemination Rep ...User application development, integratio ...DoWIssue trackerReportingD5.1 Integrated Issue Management and Tes ...D5.2 User registration, authentication a ...D5.3 User application for importing Nano ...D5.4 User application for importing Nano ...D5.5 User application for searching and ...D5.6 User application for conformance to ...D5.7 Final report on User ApplicationsServicesCommunity outreachCollaborations trackerDoWIssue trackerReportingD1.1 Requirements Analysis and Systems D ...D1.2 Use Cases and Test SuiteD1.3 Sustainability PlanD1.4 User GuidanceD1.5 Evaluation

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eNanoMapper

documentation map V1.0

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Data User Link
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Development
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API User Link
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AMBIT web services User Link
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Services
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Database
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Version AMBIT v3.0.2
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Data access User Link
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Search

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Data sources User Link
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User guidance
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Tutorials
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Entering and analysing nano safety data

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AMBIT user guide User Link
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Webinars
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A substance database to support a safe innovation approach

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Data visualization with AMBIT.JS and D3JS

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Publications
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DoW
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Issue tracker User Link
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Reporting
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D3.1 Technical Specification and initial implementation of the protocol and data management web services User Link
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D3.2 Data Management System with extended search capabilities
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D3.3 Modules and services for linking and integration with third party databases
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D3.4 ISA-Tab templates for common bioselected set of assays
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Ontology User Link
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Version 3.0
Release date 01.03.2016
Licence CC-BY 3.0
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Development
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NanoParticle Ontology User Link
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Ontologies User Link
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Feedback User Link
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Licences User Link
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Basic Formal Ontology User Link
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Slimmer User Link
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Viewer

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Test suite User Link
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Explore
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Download .owl User Link
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Bioportal User Link
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Aber-OWL User Link
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Ontology Lookup Service User Link
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User guidance
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Tutorials
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Browsing the eNM ontology with bioportal, aberowl and protege User Link
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Webinars
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Using the eNanoMapper ontology User Link
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Publications
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Hastings et al., 2015, Journal of Biomedical Semantics User Link
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Hastings et al., 2014, JBMS supplement: Bio-Ontologies meeting User Link
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DoW User Link
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Issue tracker

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Reporting
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D2.1 Framework and Infrastructure for Ontology development, versioning and dissemination User Link
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D2.2 Ontology Content Types and Existing Community efforts User Link
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D2.3 Ontology initial release User Link
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D2.4 Ontology final release
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User application development, integration & testing

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DoW
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Issue tracker User Link
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Reporting
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D5.1 Integrated Issue Management and Testing system User Link
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D5.2 User registration, authentication and authorisation User Link
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D5.3 User application for importing NanoWiki data User Link
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D5.4 User application for importing NanoSafety Cluster data User Link
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D5.5 User application for searching and downloading eNanoMapper data
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D5.6 User application for conformance to reporting and curation standards
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D5.7 Final report on User Applications
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Services
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Analysis and modelling User Link
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Applications
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JaqPotQuattro
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API

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Feedback User Link
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Source code User Link
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Image Descriptor Calculation Web Tool
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RRegrs Package

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User guidance
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Tutorials
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Image descriptor

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RRegrs package User Link
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Webinars
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Publications
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DoW
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Issue tracker User Link
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Reporting
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D4.1 Analysis and Modelling Specifications

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D4.2 Descriptor Calculation Algorithms and Methods User Link
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D4.3 nQSAR Modelling infrastructure User Link
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D4.4 Mechanism-of-action Modelling Tools
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D4.5 Design of experiments and inter-laboratory testing facilities
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D4.6 Tools for generating QMRF and QPRF reports
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Project management User Link
Attributes
Name Value
Grant agreement 604134
Project Acronym eNanoMapper
Full name eNanoMapper - A Database and Ontology Framework for Nanomaterials Design and Safety Assessment
Call FP7-NMP-2013-SMALL-7
Total budget 4 998 227 Eur
Period 36 months (2014-02-01 to 2017-01-31)
Website www.enanomapper.net
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Description
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Public website User Link
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EC CORDIS User Link
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Periodic Report 1 (summary) User Link
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Periodic Report 2 (summary)
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NanoSafety Cluster (NSC) User Link
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DoW
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Internal documentation User Link
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Issue tracker User Link
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Internal review & approval process User Link
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Reporting
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D7.1 Kick-Off Meeting User Link
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D7.2 Year 1 Meeting User Link
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D7.3 First Annual Technical and Financial Report User Link
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D7.4 Review Meeting User Link
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D7.5 Year 2 Meeting User Link
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D7.6 Second Annual Technical and Financial Report User Link
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D7.7 Final Meeting
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Partners User Link
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Douglas Connect GmbH (DC) User Link
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The National Technical University of Athens (NTUA) User Link
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In Silico Toxicology GmbH (IST) User Link
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IDEAconsult Ltd. (IDEA) User Link
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Karolinska Institutet (KI) User Link
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The European Bioinformatics Institute (EMBL-EBI) User Link
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Maastricht University (UM) User Link
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Misvik Biology (MB) User Link
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Associate partners User Link
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Dissemination User Link
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Publications User Link
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Presentations User Link
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Tutorials User Link
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Webinars User Link
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Events User Link
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DoW
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Issue tracker User Link
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Reporting
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D6.1 eNanoMapper Year 1 Dissemination Report User Link
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D6.2 eNanoMapper Year 2 Dissemination Report
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D6.3 eNanoMapper Tutorials
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D6.4 eNanoMapper Community Development Report
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D6.5 eNanoMapper Exploitation Report
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D6.6 eNanoMapper Final Dissemination Report
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Community outreach

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Collaborations tracker

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DoW
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Issue tracker User Link
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Reporting
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D1.1 Requirements Analysis and Systems Design

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D1.2 Use Cases and Test Suite User Link
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D1.3 Sustainability Plan
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D1.4 User Guidance
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D1.5 Evaluation