Ontology

The eNanoMapper ontology is developed by the eNanoMapper team. The ontology includes and defines common vocabulary terms in use in nanosafety research with a classification hierarchy and other relationships. In parts it is an extension and refinement of the Nanoparticle Ontology.

Download the ontology in .owl from: http://purl.enanomapper.net/onto/enanomapper.owl
Download and explore on Bioportal: http://bioportal.bioontology.org/ontologies/ENM
Download and explore on Aber-OWL: http://aber-owl.net/ontology/ENM
Download and explore on Ontology Lookup Service: http://www.ebi.ac.uk/ols/beta/ontologies/enm

Feedback: https://github.com/enanomapper/ontologies/issues

eNM Ontology in protege 3D nanomaterial 2

 

 

SUMMARY
Status: On the 1st of March a third version of the ontology has been released.

WEBINARS
https://www.enanomapper.net/library/using-ontology

DOCUMENTATION AND REPORTS
https://www.enanomapper.net/wp/2-ontology-development 

TUTORIALS
http://enanomapper.net/library/browsing-ontology

eNM Ontology in protege start page 2

 

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ONTOLOGY VIEWER

In order to simplify the combined search for data and ontologies in the eNanoMapper RDF backend, we have developed an interface for the visualisation of SPARQL queries. The tool provides a graphical user interface to execute SPARQL query to receive results as static Dendogram graph, interactive Sunburst graph or as file output in various formats.

EXPLORE

Ontology Viewer application https://query.enanomapper.net/enm-viewer
SPARQL interface https://sparql.enanomapper.net
Ontology Viewer source code https://github.com/enanomapper/enm-ontoviewer
Ontology Viewer issues https://github.com/enanomapper/enm-ontoviewer/issues

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SPARQL ENDPOINT

SPARQL query interface for eNanoMapper data and ontologies. A query interface to the Resource Description Framework (RDF) database with the mirrored nanoparticle ontologies and data.

EXPLORE

SPARQL endpoint https://sparql.enanomapper.net
Documentation
http://enanomapper.net/deliverables/d3/20160420_eNanoMapper_D3.2_Data_Management_System_with_extended_search_capabilities_FINAL.pdf
Docker image https://hub.docker.com/r/insilicotox/ist-enm-virtuoso